grooves12, check my questions above (my last post) along the lines of what untsmurf just mentioned. If you can eliminate testing issues, that only leaves the added chemicals.
mat012, the short answer is no, it shouldn't. High pH can impact beneficial bacteria by essentially causing them to be stressed, but that is typically only a short term impact. Like the turtle, they should be able to adapt over time and as long as the water quality stays consistent (pH stays the same, regardless of whether its acidic or alkaline), then there should not be any long term impact. The problem here is that the pH is changing, seemingly without cause, although you now have to wonder about the added chemicals as well as the testing.
For what it is worth, it may be a good time to note that there seems to be a common notion that lower pH (slightly acidic) is better for turtles. From my limited research it would seem that slightly acidic water can apparently limit the growth of harmful becteria in the water which could ultimately impact the turtle, but otherwise, turtles can tolerate a wide range of water hardness and pH. Again, the key is consistency.
In any case, since we all have the turtles best interests at heart, it makes for an interesting mystery.

1 RES, Spike (In new home with 1xPleco, 1xRed Zebra Cichlid, 1xYellow Lab Cichlid)
2 Cats, Blossom & Panda
2 Tropical tanks (plecos, platies, tetras)
2 Handsome Blue Bettas, Blueberry & ?
1 Bright Red Betta, Strawberry
1 Feeder guppy breeding tank